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I have been using lmp function from lmPerm package to calculate differences between treatment levels (2-ANOVA). Now, I am wondering how to report lmp results in a scientific publication?

I am aiming for a biological or geochemical journal, but have been using APA style in reporting statistics previously. I am not sure whether this is the desired way either, but at least their rules seem well defined.

kjetil b halvorsen
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Mikko
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    As you can see in this answer to my question here, lmPerm is perhaps not to be trusted. Results may be not correct. I recommend you use coin instead. – Henrik Nov 19 '12 at 18:23
  • @Henrik. Thanks for your comment. Hmmm...I do not experience jumping p values with my dataset. Actually I get almost the same p values than with lm function, although factors seem to be heteroskedastic to some degree. – Mikko Nov 19 '12 at 20:09
  • Do you mean lmp in place of lm (because the latter defaults to treatment contrasts, not Tukey HSD). – chl Nov 19 '12 at 20:52
  • @chl I am not sure what I mean. I edited the question. – Mikko Nov 19 '12 at 20:58

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