Plot large high dimensional dataset

Asked May 28 '16 at 11:21

Active May 28 '16 at 16:12

Viewed 176 times

I have a high dimensional dataset (12 variables) with 42000 observations. I made a clustering and I found evidence that made me choose five clusters. So I want to plot my dataset with some tool to show these clusters (if it is possible).

I tried to use Rtsne package and I get this plot:

Are there other tools like this one for plotting these data to find some evidence for clustering?

edited May 28 '16 at 16:12

gung - Reinstate Monica

145,122

asked May 28 '16 at 11:21

Federico

"I tried to use Rtsne package and" — And what? – Kodiologist May 28 '16 at 14:01
1

i get that plot – Federico May 28 '16 at 14:59
12 variables isn't really that much. You should be able to use regular methods for visualizing datasets (possibly w/ some small adaptations) & get reasonable results. You can find some suggestions in my answer here: How to extract information from a scatterplot matrix when you have large N, discrete data, & many variables? – gung - Reinstate Monica May 28 '16 at 15:29

Plot large high dimensional dataset

0 Answers0