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I have tried updating my R via Conda. Tried not using pip to install rpy2 and a few other but I still get this error of "Fatal Error: unable to initialize the JIT" whenever I try running the line %load_ext rpy2.ipython.

See another post here %load_ext rpy2.ipython causes "The kernel appears to have died. It will restart automatically" with different error message, and I am wondering if I can apply his fix with my error message?

If anyone has some insights on this, it would be really helpful.

  • I found this answer. https://stackoverflow.com/questions/39347782/getting-segmentation-fault-core-dumped-error-while-importing-robjects-from-rpy2/53639407#53639407 Which worked for me. – David Anderson Nov 16 '21 at 22:47

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