this will now start behaving as fresh network and I will loose my blocks
If you have changed the chain ID in the genesis.json file, then the blocks from your old network won't be valid on the new network, so you will need to start again.
EIP-155 - which added replay attack protection - has this to say:
If block.number >= FORK_BLKNUM and CHAIN_ID is available, then when
computing the hash of a transaction for the purposes of signing,
instead of hashing only six rlp encoded elements (nonce, gasprice,
startgas, to, value, data), you SHOULD hash nine rlp encoded elements
(nonce, gasprice, startgas, to, value, data, chainid, 0, 0)
So any transactions on your original network will have been signed in the context of the original network's chain ID1. They will be invalid on your new chain, which has a different chain ID.
1 There's an important distinction between network ID and chain ID. See What is a chainID in Ethereum, how is it different than NetworkID, and how is it used?.