We also know that following AKS given $N$ it is easy to decide the number of prime factors of $N$ is $>1$.
On other hand the problem of counting number of prime factors is considered here How hard is it to count the number of factors of an integer? and we think there is not much hope.
My problem is simpler.
Given $N$ is it as hard as factoring to decide the number of prime factors of $N$ is $>2$?
Given $N$ is it as hard as factoring to decide the number of prime factors $\bmod k$ of $N$ is $1$ for some fixed prime $k$?