5

I am searching for tools to pull CRISPR Spacers from Bacterial Genomes. I am aware of the CRISPRDB and the corresponding identification tool on the web server.

  • Are there other tools for finding CRISPR Spacers?
  • Is there a way to download the spacer sequences from CRISPRDB?
  • Is there another database that contains all validated / inferred bacterial CRISPR sequences?
Daniel Standage
  • 5,080
  • 15
  • 50
Cody Glickman
  • 173
  • 1
  • 7

1 Answers1

2

CRT (CRISPR Recognition Tool) http://www.room220.com/crt/

Crisprs Finder Online Tool https://crispr.i2bc.paris-saclay.fr/Server/

Piler-CR http://www.drive5.com/pilercr/

(Omic Tools List) https://omictools.com/crispr-detection-category

Cody Glickman
  • 173
  • 1
  • 7